Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGKKKSEKESSWIGEIEKYSRQIWLAGLGAYSKVSKDGSKLFETLVKDGEKAEKEAKSDVDAQVGAAKASARSAKSKVDEVRDRALGKWSELEEAFDKRLNSAISRLGVPSRNEVKELHSKVDTLTKQIEKLTGVSVKPAAKAAAKPAAKPAAKPAAKTAAAKPAAKPAAKAAAKPAAKPAAKKTAAKTAAAKPAAKPAAKPTAKAA---AKPATKPAAKAAAKPAAKPAAAK----------PAAKPAAKPAAATAAKPAAKPAAKPAAKKPAAKKPAAKPAAAKPAAPAASSSAPAAPAATPAASAPAANAPATPSSQG |
1YVE Chain:I ((237-524)) | ----LEQEYKSDIFGER-----GILLGAVHGIVEC------LFRRYTESGMSEDLAYKNTVECITG--VISKTISTKGMLALYNS-------LSEEGKKDFQAAYSASYYPSMDILYECYEDVAS---------GSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGEKVRSVRPAGDLGPLYPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIEAVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILSQQALVAVDNGAPINQDLISNFLSDPVHEAIGVCAQLRPSVDISVTADADFVRPELRQA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 134487 for 2196 contacts (61.2/contact) +
2D Compatibility (PS) -29502 + (NN) -10072 + (LL) 1972
1D Compatibility (HY) -6400 + (ID) 2000
Total energy: 88485.0 ( 40.29 by residue)
QMean score : 0.267
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