Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFNTEVQPGICMEPDAITQEYVFNHTMLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAMTRGEEVPDAVDERQRYTFGRQSVLELTHNWGSESDDSQ-YHNGNQDPRGFGHICFSVPDLVAACERFETLGVNFVKPLDRG-MKNVAFISDPDGYWVEIVQASLNGEMGRG
2ZA0 Chain:B ((20-175))
-----------CSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEIL-----------
General information:
TITO was launched using:
RESULT:
Template:
2ZA0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78858 for 1020 contacts (-77.3/contact) +
2D Compatibility (PS) -16788 + (NN) -9924 + (LL) 820
1D Compatibility (HY) -18000 + (ID) 4550
Total energy: -127300.0 ( -124.80 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_2ZA0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZA0-query.scw
PDB file :
Tito_Scwrl_2ZA0.pdb
: