Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNRILLLGANGQVGWELQRALAPLG-ELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYTAVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSVPFAEDAPTGPLSVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGAPTSAELIADVTAQALQRLCWDVELAARASGTYHLVASGETSWHLYARFVIEQALERGWELQATPQRVLPIATEDYPVPAKRPANSRLDNRKLQQVFGLVLPDWRYHAGRMIQELSEQGPL |
3SC6 Chain:C ((7-273)) | --RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPT---YVADLNVM-INKL-----IHTSLYGTYHVSNTGSCSWFEFAKKIFSYA--------NMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSW----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130804 for 2298 contacts (-56.9/contact) +
2D Compatibility (PS) -28828 + (NN) -12384 + (LL) 2868
1D Compatibility (HY) -21200 + (ID) 4900
Total energy: -195248.0 ( -84.96 by residue)
QMean score : 0.554
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