Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKSQEPTAALDAEQVAAYLSQHPEFFVEHDELIPELRIPHQPGDAVSLVERQVRLLRERNIEMR-HRLSQLM-DVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLRHEFQVPYVSLILFSDSSVSVGRSVSSAEAHQAIGGLLSGGKTVCGVLRPHELAFLFGESDRDEIGSAAVVSLSFQGLHGVLAIGSPDPQHYKSSLGTLFLGYVAEVLARVLPRFSSPLRSVR
3E98 Chain:A ((67-244))
-----------------------------------------------VSLVERQVRLLRERNIE--MRHRLSQLMDVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLRHEFQVPYVSLILFSDSSVSVGRSVSSAEAHQAIGGLLSGGKTVCGVLRPHELAFLFGESDRDEIGSAAVVSLSFQGLHGVLAIGSPDPQHYKSSLGTLFLGYVAEVLARVLPRF--------
General information:
TITO was launched using:
RESULT:
Template:
3E98.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118974 for 1250 contacts (-95.2/contact) +
2D Compatibility (PS) -19508 + (NN) -14295 + (LL) 4028
1D Compatibility (HY) -24800 + (ID) 8450
Total energy: -181999.0 ( -145.60 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_3E98.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E98-query.scw
PDB file :
Tito_Scwrl_3E98.pdb
: