Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKAGNETQISEFLLLGFSEKQELQPFLFGLFLSMYLVTVLGNLLIILAAISDSCLHTPMYFFLSNLSFVDICFASTMVPKMLVNIQTQSKVITYAGCITQMCFFVLFIVLDSLLLTVMAYDQFVAICHPLHYTVIMSPQLCGLLVLVSWIMSVLNSMLQSLVTLQLSFCTDLEIPHFFCELNEMIHLACSDTFVNNMVMHFAAVLLDGGPLVGILYSYCRIVSSIRAISSTQGKYKALSTCASHLSVVSIFYGTGLGVYLSSTMTQ--------N----LHSTAVASVMYTVVTPMLNPFIYSLRNKDIKGALTQFFRGKQ
2LNL Chain:A ((37-323))----------------------LNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASK-VNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLT-QKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHP----NNSSPVCYEVLGND----TAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMG-QKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG


General information:
TITO was launched using:
RESULT:

Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -206371 for 2003 contacts (-103.0/contact) +
2D Compatibility (PS) -26807 + (NN) 3945 + (LL) 2844
1D Compatibility (HY) -21600 + (ID) 2150
Total energy: -250139.0 ( -124.88 by residue)
QMean score : 0.232

(partial model without unconserved sides chains):
PDB file : Tito_2LNL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LNL-query.scw
PDB file : Tito_Scwrl_2LNL.pdb: