Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKAGNETQISEFLLLGFSEKQELQPFLFGLFLSMYLVTVLGNLLIILAAISDSCLHTPMYFFLSNLSFVDICFASTMVPKMLVNIQTQSKVITYAGCITQMCFFVLFIVLDSLLLTVMAYDQFVAICHPLHYTVIMSPQLCGLLVLVSWIMSVLNSMLQSLVTLQLSFCTDLEIPHFFCELNEMIHLACSDTFVNNMVMHFAAVLLDGGPLVGILYSYCRIVSSIRAISSTQGKYKALSTCASHLSVVSIFYGTGLGVYLSSTMTQ--------N----LHSTAVASVMYTVVTPMLNPFIYSLRNKDIKGALTQFFRGKQ |
2LNL Chain:A ((37-323)) | ----------------------LNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASK-VNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLT-QKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHP----NNSSPVCYEVLGND----TAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMG-QKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206371 for 2003 contacts (-103.0/contact) +
2D Compatibility (PS) -26807 + (NN) 3945 + (LL) 2844
1D Compatibility (HY) -21600 + (ID) 2150
Total energy: -250139.0 ( -124.88 by residue)
QMean score : 0.232
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