Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGDHMVLGSSVTDK-KAIILVTILLLL-------------------------RLVAIAGNGF----ITAALGVEWVLRRMLLPC-DKLLVSLG-ASRF--CLQSVVMGKTIYVFLHPMAFPYNPVLQFLAF-QWDFLNAATLWSSTWLSVFYCVKIATFTHPV-FFWLKH--------KLSGWLPWM-LFSSVGLSSF-T-TILFF------IGNHRMYQNYLRNH--LQPWNVTGDSIRSYCEKFYLFPLKMITWTM-------------PTAVFF-ICMILLITSLGRHRKK-------------ALLTTSGFREPSVQAH----IKALLALLSFAMLFISYFLSL---VFS-AAGIFPPLDF-----KFWVWESVIYLCAAVHPII---------LLFSNC-RLRAVLKSRRSSRCGTP |
| 4QT9 Chain:A ((19-432)) | LSDDAL---------MDTVQRRTFLYFWEGAEPNSGLAPERYHVDGVYPQNDANVVTSGGSGFGIMAILAGIDRGYVTREEGLARMERIVSFLEKADRFHGAYPHWWYGDTGKVKPFGQKDNGGDLVETAFLMQGLLAVHQYYANGNDKEKAIAQRIDRLWREVDWDWYRKGGQNVLYWHWSPTYGWEMDFPIHGYNECMIMYILAAASPTHGVPAAVYHDGWAQNGAIVSPHKVEGIELHLRYQGTEAGPLFWAQYSFLGLDPVGLKDEYCPSYFHEMRNLTLVNRAYCIRNPKHYKGFGPDCWGLTASYSVDGYAAHSPNEQDDKGVISPTAALSSIVYTPEYSLQVMRHLYNMGDKVFGPFGFYDAFSETDNWYPQRYLAIDQGPIAVMIENYRTGLLWKLFMSHPDVQAGLTKLGFNTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -329946 for 2299 contacts (-143.5/contact) +
2D Compatibility (PS) -30775 + (NN) -2281 + (LL) 372
1D Compatibility (HY) -6400 + (ID) 2900
Total energy: -371930.0 ( -161.78 by residue)
QMean score : 0.217
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