Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MVGDTLKLLSPL--MTRYFFLLFYSTDSSDLNENQHPLDF------------DEMAFGKVK--------SGISFLIQTGVGILGNSFLLCFYNLILFTGH----------KLRPTDLILSQ--LALANSMVLFFKGIPQTMAAFGLK--YLLNDTGCKF-----------------------------VFYYHRVGTRVSLSTICLLNGFQAIKLNPSICRWMEIKIRSPRFIDFCCLLCWAPHVLMNA----------------------SVLLLVNGPLNSKNSSAKNNYGYCSYKASKRFSS-----LHAVLYFSPDF-MSLGFMVWASGSMVFFLYRHKQQVQHNHSNRLSCRP--------SQEARATHTIMVLVSSFFVFYSVHSFLTIWTTVVANPGQWIVTN--SVLVASCFPARSPF----VLIMSDTHISQFCFACRTRKTLFPNLVVMP |
| 1X9P Chain:A ((1-521)) | TGGRNSIRYSELAPLFDTTRVYLVDNKSTDVASLNYQNDHSNFLTTVIQNNDYSPGEASTQTINLDDRSHWGGDLKTILHTNMPNVNEFMFTNKFKARVMVSRSLTKDKQVELKYEWVEFTLPEGNYSETMTIDLMNNAIVEHYLKVGRQNGVLESDIGVKFDTRNFRLGFDPVTGLVMPGVYTNEAFHPDIILLPGCGVDFTHSRLSNLLG---IRKRQPFQEGFRITYDDLEGGNIPALLDVDAYQASLKDFATRAEEKRAEAEPQKKPVIKPLTEDSKKRSYNLISNDSTFTQYRSWYLAYNYGDPQTGIRSWTLLCTPDVTCGSEQVYWSLPDMMQDPVTFRSTSQISNFPVVGAELLPVHSKSFYNDQAVYSQLIRQFTSLTHVFNRFPENQILARPPAPTITTVSENVPALTDHGTLPLRNSIGGVQRVTITDARRRTCPYVYKALGIVSPRVLSSR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236886 for 2471 contacts (-95.9/contact) +
2D Compatibility (PS) -36475 + (NN) 8001 + (LL) 396
1D Compatibility (HY) -5200 + (ID) 2400
Total energy: -272564.0 ( -110.31 by residue)
QMean score : 0.110
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