Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKLVIIENMAEIMLFSLDLLLFSTDILCFNFPSKMIKLPGFITIQIFFYPQASFGISANTILLLFHIFTFVFSHRSKSIDMII----SHLSLIHILLLFTQAILVSLDFFGSQ-NTQDDLRYKVIVFLNKVMRGLSICTPCLLSVLQAIISPSIFSLAKLKHPSASHILGFFLFSWVLNMFIGVIFCCTLRLPPVKRGQSSVCHTALFLFAHELHPQET----VFHTNDFEGCHLYRVHGPLKRLHGDYFIQTIRG--YLSAFTQPACPRVSPVKRASQAILLLVSFVFTYWVDFTFSFSGGVTWINDSLLVWLQVIVANSYAAISPLMLIYADNQIFKTLQMLWFKYLSPPKLML-KFNRQCGSTKK |
| 4X2Z Chain:A ((9-309)) | QKTIYLTEDGVK-------------------YRSIVLKPGD---------SLGQFGQ-------VYAKNKIVFTADDVEDKEILYVPTTDKSILEYYGLDAQKYVIYLQTLAQKWNVQYRDNFLILEWRDG---------NCWISSAIVLLQAAKIRFKGFLTEAWAKLLGGDPTDFVAWCYASC---------TAKVGDFSDANWLLANLAEHFDADYTNAFLKKRVSCNCGIKSYELRG------LEACIQPVRATNLLHFKTQYSNCPTCGANNTDEVIEASLPYLLLFATD------GPATVDCDEDAVGTVVFVGSTN---SGHCYTQAAGQAFDNLAKDRKFGKKSPYITAMYTRFAFKNETS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229244 for 2139 contacts (-107.2/contact) +
2D Compatibility (PS) -30434 + (NN) -2570 + (LL) 6708
1D Compatibility (HY) -1600 + (ID) 2450
Total energy: -259590.0 ( -121.36 by residue)
QMean score : 0.248
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