Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVRLIPDNLNIKFSKYRKLTALISIILVIFSLFIVVLRGVNLGIDFTGGILMEIKSSSED-------HA----VLNILKENGF---TIQSSKAGNNLVMYFREEGNEGKIKKIKSVLEEKLGSSISYRKIDYIGPRISSTQILEGILSMFIAIVGIFFYVWFRFNWQCGFGGTIALIHDVILTVGFVSLTGIKFNISSVAALLTVIGYSINNSVVIYDRIREYQKSGKNRQMSDIVDASINVTLFRTVLTSGTTLLATIPLTLICTDTVRDFSLIIFFGILIGTCSAIFISAPILTCKVLISRIAV |
| 3AQO Chain:A ((42-94)) | -------------------------------------------------GLRIVLEA-DVENPTLDDLEKARTVLENRINALGVAEPLIQIQG-QKRIVVELPGLSQADQDRALKLIGQRAVLEFRIVKEGATGTTVAQINQALRENPRLNREELEKDLIKPEDLGPPLLTGADLADARAVFDQFGRPQVSLTFTPEGAKKFEEVTRQNIGKRLAIVLDGRVYTAPVIRQAITGGQAVIEGLSSVEEASEIALVLRSGSLPVPLKVAEIRAI----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20648 for 168 contacts (-122.9/contact) +
2D Compatibility (PS) -4458 + (NN) -5146 + (LL) 6524
1D Compatibility (HY) -2800 + (ID) 300
Total energy: -26828.0 ( -159.69 by residue)
QMean score : 0.483
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