Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPEVTKLDNGLRIITEQMRDIDSVALNIRVGVGSRAESANQNGISHFLEHMAFKGTKTRTAFEIAKTFDDIGGVFNASTGRERTSYYAKVLKKDVKIGIDILIDILMNSTFPKDELEREKGVVIQEIFQINDSPSDIIFDKYFEAAYKDQPFGRSILGTQDTVKSFAQGDLNNYINEHYFGENIIFAVAGNVEHEEIAQLTKDFL-------SKVSSQKLKESQNANCTGGEYLEHRKLDQVHLLIGFPSVSCHDDRYHTFQVLDSIL---------GSGMSSRLFQEVREKQGLAYSVYSFNSSYTDTGMLSIFAGTDSS--NLDKLLKSITTELKKLSTNDLREEEVNRVKERIKSQILMSRESVSSCAEALEHYYGNYNRYISKDELIEKTSAVTTADVKRAVEELLSKHEKTTLAAIGEIKSLPGYDKVVSMLRA |
| 1HR9 Chain:D ((10-432)) | ----SKLPNGLTIATEYIPNTSSATVGIFVDAGSRAENVKNNGTAHFLQHLAFKGTQNRPQQGIELEIENIGSHLNAYTSRENTVYYAKSLQEDIPKAVDILSDILTKSVLDNSAIERERDVIIRESEEVDKMYDEVVFDHLHEITYKDQPLGRTILGPIKNIKSITRTDLKDYITKNYKGDRMVLAGAGAVDHEKLVQYAQKYFGHVPKSESPVPLGSPRGPLPVFCRGERFIKENTLPTTHIAIALEGVSWSAPDYFVALATQAIVGNWDRAIGTGTNSPSPLAVAASQNGSLANSYMSFSTSYADSGLWGMYIVTDSNEHNVRLIVNEILKEWKRIKSGKISDAEVNRAKAQLKAALLLSLDGSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWANYRL-QNKPVSMVALGNTSTVPNVSYIEEKLNQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HR9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160822 for 3375 contacts (-47.7/contact) +
2D Compatibility (PS) -43283 + (NN) -13779 + (LL) 336
1D Compatibility (HY) -26000 + (ID) 6600
Total energy: -250148.0 ( -74.12 by residue)
QMean score : 0.510
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