Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MCFWYHSSKKAARKEEKIDYLDNKLKMFRNIEFIVSAISLAPLIACVFCPVLSEFGLVTLGVNFLVCFVGSLAFHMKHEKKSDNIEKAKEAVNSYNTPPSYFQNPDVGNSFPSASPYGSQYFPFY |
3LJM Chain:A ((4-29)) | --EWEALEKKCAALESKLQALEKKLEALEHGNH-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LJM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6946 for 94 contacts (73.9/contact) +
2D Compatibility (PS) -2757 + (NN) -1081 + (LL) 5472
1D Compatibility (HY) 2800 + (ID) 50
Total energy: 11330.0 ( 120.53 by residue)
QMean score : 0.475
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