Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MGSKSAFNSLDPALLYKGDLLRRMLFTLIALICYRLGTYVPIPGINLDIINDIFPKEGAGIFGVFNLFSGGALARMTILVLNVMPYIVASIVMQLLSSAVKGINEVKNDGELGRRRMNSYIRYMTIVFCIFQSVTILIGLERMNREGTLVVIEPGVMFRTVGIFSLLGGTMFLIWLGEQISASGIGNGISLIIFTGIISELHNAF------SFLLTLNKNGSMSLLIILFVFVLFFLLLLLIIFVESSYRKVTVQYPKKQFKRLHSDDFTYIPLKINLSGVIPTIFANAILLTPVSIANFYKGHAFSDF-----------ILNYF------------MANKVVYIAAYLALIVFFNFFYTNFI-FNPEENADFLKKNGGFIPGRRPGKHTSDYLQDIVFKLTFIGSAYLVVICTVPEVMRYYYDMPFIFGGTSLLIIVNVTTDTIMQIQSYIFSNRYDSWIKKYESKTKKLR |
| 1RH5 Chain:A ((2-423)) | KKLIPILEKIPEVELPVKEITFKEKLKWTGIVLVLYFIMGCIDVYTAG---------AQIPAIFEFWQTITASRIG--TLITLGIGPIVTAGIIMQLLVGS--GIIQMDLSIPENRALFQGCQKLLSIIMCFVEAVLFVG---------AGAFGILTPLLAFLVIIQIAFGSIILIYLDEIVSKYGIGSGIGLFIAAGVSQTIFVGALGPEGYLWKFLNSLIQGVPNIEYIAPIIGTIIVFLMVVYAECMRVEIPLAHGR------IKGAVGKYPIKFVYVSNIPVILAAALFANIQLWGLALYRMGIPILGHYEGGRAVDGIAYYLSTPYGLSSVISDPIHAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIS-----------EKAIEHRLKRYIPPLTVMSSAFVGFLATIANFIGAL------GGGTGVLLTVSIVYRMYEQLLR---------------ERT---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1RH5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -366921 for 3027 contacts (-121.2/contact) +
2D Compatibility (PS) -38884 + (NN) -3617 + (LL) 3776
1D Compatibility (HY) -34400 + (ID) 3450
Total energy: -443496.0 ( -146.51 by residue)
QMean score : 0.294
|
|
|