Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAYEHKWYIIKVNYGHERNILELVSNAVYFKEVFIPYQTVCNSKSDIKEVCEVYVCMYLCDESRDILSKTLGFHSGDSSNFKIVLDEEVNLKRKEFNKYKWYILRVASNYEEKVCQHVLENSMRLGVNDYFKEVFIPYEELSEVELRSKKAAMRRKCFPGYVFLYVDLCDEVLNFVNNIPKSLKVYGFLKNGSVPKVISDDEIYSMCNALYNAQETKKLSHGYEKGEKVKINDGLFQNFTGKVDMINDEKKIINIE-VSILGKPTIIELDLAQVEKIED |
3P8B Chain:B ((2-147)) | -------------------------------------------------------------------------------------------------AGKIFAVRVTHGQEETTAKLIYSKVR---------TYNLPIYAILA-----------PSRVKGYIFVEAPNKGVVDEAIRGIRHAR---GV-----LPGEVPFKEIEHFLEEK-------PAVSGLEPGDLVEVIAGPFKGQKAKVVKIDESKDEVVVQFIDAIV-PIPVTIKGDYVRLISK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P8B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80559 for 995 contacts (-81.0/contact) +
2D Compatibility (PS) -15690 + (NN) -4536 + (LL) 9984
1D Compatibility (HY) -4800 + (ID) 1400
Total energy: -97001.0 ( -97.49 by residue)
QMean score : 0.480
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