Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MVKLTTKIASLKLFASYAIATYILVMLTSALNLFKGYVADTFYIAETLLIILTIILIII--LTTEQTWKHHDLWRRIVEVLLLLMALTGNVFTLLMFVSIRRYQRTSQIHSYNGWESFIRKTTRHRIAIIGLLILVYMLTLSIVSQFTFDTTLATKNQFNALLHGPSLAYPFGTDDFGRDLFTRVVVGTKLTFSISIISVVIAVIFGVLLGTIAGYFNHIDNLIMRILDVVFAIPSLLLAVAIIASFGASIPNLIIALSIGNIPSFARTMRASVLEIKRMEYVDAARITGENTWNIIWRYILPNAIAPMIVRFSLNIGVVVLTTSSLSFLGLGVAPDVAEWGNILRTGSNYLETHSNLAIVPGVCIMFVVLAFNFIGDAVRDALDPRIH |
| 4QTS Chain:A ((1-369)) | MKMVVLKPKINS-KFHFKIFHSNSLFSAIVNNYIKLYGREDLEKNIEKIKNIRLSSLLYKIKNIYLIPKPEHPEFYPKDIKKI--------------QFFSIKAYKEL--LDNELDWKNKIKHIVDYQ--TINKSIVI---------------SEKEIEEIKRIFGIKAEKLKHAKISLISKHLEQKVADKGQLYNIEFIKLNENVEFYFLID-----YNNEDKEFIKKLEASIK--------------------LIEDEGLGG-AGFFEKVEIVDLPEDFNEILDENSKYNNLEYKMLLGVGIPNKDDIKNIEYYKLIEI------GGYIYSLECLTKPKRNILALTEGS----------IVKNDFIGDVKDVYTH-GKPILLPFNP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QTS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -296444 for 2350 contacts (-126.1/contact) +
2D Compatibility (PS) -32458 + (NN) 187 + (LL) 7596
1D Compatibility (HY) -10800 + (ID) 2550
Total energy: -334469.0 ( -142.33 by residue)
QMean score : 0.097
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