Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEIIVYTQNDCPPCTFVKNYLNEHQIDFEERNIN-N-----QQYRNEMID-FDAFSTPFILLNG-NPMYHVDLDEINKVLNIQD
3NZN Chain:A ((22-102))
-GKVIMYGLSTCVWCKKTKKLLTDLGVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTIINDEKAIVGFKEKEIRESLG---
General information:
TITO was launched using:
RESULT:
Template:
3NZN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57762 for 505 contacts (-114.4/contact) +
2D Compatibility (PS) -7929 + (NN) -3914 + (LL) 456
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -74299.0 ( -147.13 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_3NZN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NZN-query.scw
PDB file :
Tito_Scwrl_3NZN.pdb
: