Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------MKKNFIGKSILSIAAISLTVSTFAGESHAQTKNVEAAKKYDQYQTNFKKQVNKKVVDAQKAVNLFKRTRTVATHRKAQRAVNLIHFQHSYEKKKLQRQIDLVLKYNTLK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3VS8 Chain:A ((7-410)) | HPNSAVLADFIPVQLAKPVPQRITLELTAYGFA-RAHCLSNGITDEEGFVQVYKTVKEKFDKYAVSPAQI-----KQRQLVYFPKLTDIRFGDGNFDIADPEPDQAHLRLFDIKKDPRGADLKTRHESYAKVVGKGLEQMFEGTLEAPDDLIHVTCSGYLAPSPAERMVADRGWFETTVTHSYNMGCYGAFPAIKMAHGMLASAQWGATPPKTRVDIAHTELMSAHNNIAESRVDNIISATLFSDGLIKYSVYPEDELRRQGLRGLRILAMSEHLLPDSADTMTGVPGSHQFVMTLSPLVPAIIKRHVRAFAVDLLRRAGMDFERDKDALSFAIHPGGPKIVDHVQEELGLAEDQVAISKSVFLENGNMSSSTIPHILKAYLEEATVGTRIACLGFGPGLTAAGLVLEKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VS8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12809 for 608 contacts (21.1/contact) +
2D Compatibility (PS) -9977 + (NN) 5751 + (LL) 312
1D Compatibility (HY) -800 + (ID) 700
Total energy: 7395.0 ( 12.16 by residue)
QMean score : 0.260
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