Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKIILAADVGGTTCKLGIFTPELEQLHKWSIHTDTSDSTGYTLLKGIYDSFVEKVNENNYNFSNVLGVGIGVPGPVDFEKGTVNGAVNLYWPEKVNVREIFEQFVDCPVYVDNDANIAALGEKHKGAGEGADDVVAITLGTGLGGGIISNGEIVHGHNGSGAEIGHFRADFDQRFKCNCGRSGCIETVASATGVVNLINFYYPKLTFRSSILELIKENKV---TAKAVFDAAKAGDQFCIFITEKVANYIGYLCSIISVTSNPKYIVLGGGMSTAGPILIENIKTEYHN-LTFAPAQFETEIVQAKLGNDAGITGAAGLIKTYVLDKEGVK |
| 3VGK Chain:B ((3-311)) | ---LTIGVDIGGTKIAAGVVDEEGRILSTFKVATPPT-------AEGIVDAICAAVAGASEGH-DVEAVGIGAAGYVDDKRATVLFAPNIDWRHE-PLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDG-LLCGCGSQGCWEQYASGRALVRYAKQRANATPENAAVLLGLGDGSVDGIEGKHISEAARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLAR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200920 for 2721 contacts (-73.8/contact) +
2D Compatibility (PS) -32617 + (NN) -14218 + (LL) 1372
1D Compatibility (HY) -15200 + (ID) 5050
Total energy: -266633.0 ( -97.99 by residue)
QMean score : 0.394
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