Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKILFDVDGIFLSEERCFDVSALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNL |
3MC1 Chain:A ((84-216)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD--AIVGSSLD-----------GKLSTKEDVIRYAMES-------------LN-IKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGS---YEELKNAGANYIVNSVDELHKKILE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51214 for 1000 contacts (-51.2/contact) +
2D Compatibility (PS) -14496 + (NN) -7459 + (LL) 19452
1D Compatibility (HY) -4800 + (ID) 1800
Total energy: -60317.0 ( -60.32 by residue)
QMean score : 0.419
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