Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFEGKLIGKDLKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPLVAKKLASSGNYDAIITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESIEQAVERAGTKAGNKGAEAAVSAIEMANLLKSIKA
1ZIS Chain:D ((5-154))
---QGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE-
General information:
TITO was launched using:
RESULT:
Template:
1ZIS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109084 for 1321 contacts (-82.6/contact) +
2D Compatibility (PS) -17171 + (NN) -12141 + (LL) 404
1D Compatibility (HY) -16800 + (ID) 5100
Total energy: -159892.0 ( -121.04 by residue)
QMean score : 0.646
(partial model without unconserved sides chains):
PDB file :
Tito_1ZIS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZIS-query.scw
PDB file :
Tito_Scwrl_1ZIS.pdb
: