Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMKLNLFINANETES-YIDIHAPKMNDHVQSIINAVNDLDKSHTLV------GYIDKEIHIINVSDVITFQVINKNVTA------------ITSNQKFKLKLRLYELEKQLPQHFIRISKSEIV---------NKYYIEKLLLE-PNGLIRMYLKDAHYTYSSRRYL-KSIKERLSI------------------------------ |
3FD3 Chain:A ((1-207)) | RVTLNIATNADSLGTWFLDAVSKFTGGSDYLVNIAVDDQDHTVEWLRGGRVLAAVTAHDKPVQGCRVTPLGVLRYHATASPDFMARHFADGVTPAALARAPGLTFNQKDRLQASWIRTALGEDVSYPTHWLPSTDGFVKASLAGMGWGLNPVQLVAEHLAAGRLVELMPGTPLDIPLYWQVNRLAAERLAGLTANMVGTARVVLMPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FD3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5132 for 1000 contacts (5.1/contact) +
2D Compatibility (PS) -14914 + (NN) 5296 + (LL) 0
1D Compatibility (HY) -800 + (ID) 1250
Total energy: -6536.0 ( -6.54 by residue)
QMean score : -0.035
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