Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLISIAFLLVLCLLNYSSFRMLKSFLTLKKISRYAYLGFFILLSAGEATFVFYRNVMPSHLFVLTSACSFVSFIAFVFSLSFYGFSYSVEKIDFLPSRRKGLKNFLRIGFYLALLGYFWRGFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQK------DFVNYIVEEVNQKEVDMVLIGGDLVDENIE---KVKSFLLPLNNL-----KSTHGTFYVPGNHEYYHGIEP---ILSFLNTLDMTILGNECV--HL------GGINLCGVYDYFAR------------------KRQDFAPDIDKALKKRDSSKPTILLAHQPKQIR--------------SLKESHSIDLVLSGHTHAGQIFPFSLLVKLAQTYLHGLYKHSGTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQA |
| 1UTE Chain:A ((4-227)) | ---------------------------------------------------------------------------------------------------------------------------------------------TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWN---FPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA-KEDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPKEMSV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UTE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88301 for 1192 contacts (-74.1/contact) +
2D Compatibility (PS) -17609 + (NN) -3040 + (LL) 12560
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -103290.0 ( -86.65 by residue)
QMean score : 0.423
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