Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLGKKNEEVLI----DENLVGGVIALDRLAKLNKANRTFKRAFYLSMVLNVA-----AVTSIVMMMPLKKTDIFVYGIDRYTGE------FKIVKRSDARQI--VNSEAVVDSATSKFVSLLFGYSKNSLRDRKDQLMQYCDVSFQTQAMRMFNENIRQFVDKVRAEAIISSNIQREKVKNSPLTRLTFFITIKITPDTMENYEYITKKQVTIYYDFARGNSSQENLIINPFGFKVFDIQITDLQNEQTVSEILR---------KIKEVESKNKALNK |
| 4AW9 Chain:A ((1-263)) | --GGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRP-NGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFIYFTDHGST------GILVFPNEDLHVKDLNETIHYMYKH-KMYRKMVFYIEACESGSMMNHLPDNINVYATTAANPRESSYACYYDEKRSTYLGDWYSVNWMEDSDVED-LTKETLHKQYHLVKSHTQTSHVMQYGNKTISTMKVMQFQGMKR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12243 for 1999 contacts (-6.1/contact) +
2D Compatibility (PS) -24109 + (NN) 2441 + (LL) 1204
1D Compatibility (HY) -8000 + (ID) 1850
Total energy: -42557.0 ( -21.29 by residue)
QMean score : 0.169
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