Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEKSFLKSKQLVLCGLGVLMLQACTCPNTSQRNSFLQDVPYWMLQNRSQYLTQGVDSSHIVDGKATEEIEKIATKRATIRVAQNIVHKLKEAYLSKSNRIKQKITNEMFIQMTKPIFDSLMNVDRLGIYINPNNEEVFALVRARSFDKDALSEGLHKM--SLDDQAVSILVSKVEEIFKDSINYGDVKVPIAM
2OXO Chain:A ((43-87))
-----------------------------------------------------------------------------------------------------------------------------------------------LEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVA
General information:
TITO was launched using:
RESULT:
Template:
2OXO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13357 for 199 contacts (-67.1/contact) +
2D Compatibility (PS) -4600 + (NN) -3167 + (LL) 11536
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -11838.0 ( -59.49 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_2OXO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OXO-query.scw
PDB file :
Tito_Scwrl_2OXO.pdb
: