Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDSFEILKALKSLDLL-KNAPAWWWP-NALKFEALLGAVLTQNTKFEAVLKSLENLKNAFILENDDEINLKKIAYIEFSKLAECVRPSGFYNQKAKRLIDLSKNILKDFQSFENFKQEVTKEWLLDQKGIGKESADAILCYVCAKEVMVVDKYSYLFLKKLGIEI--E----DYDELQHFFEKGVQENLNSALALYENTISLAQLYARFHGKIVEFSKQKLELKL
3FSP Chain:A ((11-204))
-FPAREFQRDLLDWFARERR-D-LPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFP-------TLEALADADEDEVLKAWEGLGYYS-RVRNLHAAVKEVKTRYGG----KVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVDGNVMRVLSRLFLVTDDIAKPSTRKRFEQIVR----EIMAY------------ENPGAFNEALIELGALVCTPRR
General information:
TITO was launched using:
RESULT:
Template:
3FSP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66773 for 1458 contacts (-45.8/contact) +
2D Compatibility (PS) -19938 + (NN) -13697 + (LL) 2768
1D Compatibility (HY) -7200 + (ID) 1450
Total energy: -106290.0 ( -72.90 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_3FSP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FSP-query.scw
PDB file :
Tito_Scwrl_3FSP.pdb
: