Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIGVYIISLKESQRRLDTEKLVLESNEKFKGRCVFQIFDAISPKHQDFEKLLQELYNAQSLLQSDWYHSYVGAGLTLPELGCYLSHYLLWKECVKLDQPVVILEDDVTLESHFMQALEDCLKSPFDFVRLYGCYWYYHETKFHVLPKEFVFPPFDHSFKNNPILEKFKKFFDVSRFLNLSTHKVIHYILKKIQKSYYATHEKEAFFLEHFYLTSVYVASTAGYYLT------PKGAKTFIEATESFKIIEPVDMFMDNSAYHDVANLTYVPCPVSLSEHSLDSTIQKPQKKSLKSYPLPPQKSTFKNLFYYSLNAKKRLNAFQQYSKQYAPLKTPKEV |
1W4S Chain:A ((26-171)) | --------------------------------------------------------------------------------------------MYHVGDYVYVEPAEANLQPHIV-CIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLE----------------KEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPEN-FRDEDVYVCESRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFA---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70477 for 936 contacts (-75.3/contact) +
2D Compatibility (PS) -14684 + (NN) 661 + (LL) 12284
1D Compatibility (HY) -10800 + (ID) 1150
Total energy: -84166.0 ( -89.92 by residue)
QMean score : 0.047
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