Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQKILILGIGNILFGDEGIGVHLAHYLKRNFSFFPSVDIVDGGTMAQQLIPLITSYEKVLILDCVSAKGVEIGSVYAFDFKDAPKEITWAGSAHEVEMLHTLRLTEFLGDLPKTFIVGLVPFVIGSETTFKLSSEMLNALETALKAIETQLNAWGVKMQRTDHIALDCIAELSYKGF |
| 1RLI Chain:A ((5-92)) | ----KIAVINGGT-RS-GGNTDVLAEKAVQGFD----AEHIYL--DYDSIIERILQCHILIFATPIYWFG-MSGTLKLFIDRWSQTLRDPRFPDFKQQMSVKQAYVIAVGGDNPKIKGLPLIQQFEHIFHFMGMSFKGYVLGEGNRPGDILRDHQALSAASRLLKRSDA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RLI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46155 for 398 contacts (-116.0/contact) +
2D Compatibility (PS) -6777 + (NN) -302 + (LL) 980
1D Compatibility (HY) 1200 + (ID) 450
Total energy: -51504.0 ( -129.41 by residue)
QMean score : 0.288
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