Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSWMKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALSNQENTDDKLPVVHSIKTINDVSSVGFEWS--KVA-DTYDIDGFVLYRLKKDSKLKRIATIKNPYATHYYDEGLETESSYTYQLATYKGDKISKLSEPILVKT--SFINPVESVFASLEYPKSVKVFWSPHPNPSVSKYIIQRQN-KDGK-----FLNVGAVKNRLFVEFFDKDLEDGQKYRYQIIAENFMGDKSRPSVIVEGKTKDLPKEIANVRVSQNLTRQIELSWDKSP----EEDVIAYRIYASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRYYKVVAVDKTHLEGALPKEPAMGETSDRPEAPIITKGTIQDSSALIQWENNPSPKIATYAVYRFEANSKTPLRFGNITQNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRLFLER |
| 3L5I Chain:A ((22-277)) | ----------------------------------------------------------YRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYT----VNATKLTVN-L-TNDRYLATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKD-NMLWVEWTTPRE-SVKKYILEWCVLSDKAPCITDWQQE---DGTVHRTYLRGNLAESKCYLITVTPVYADGPG-SPESIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTPK----------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38655 for 1562 contacts (-24.7/contact) +
2D Compatibility (PS) -25831 + (NN) -4686 + (LL) 9576
1D Compatibility (HY) -2000 + (ID) 2000
Total energy: -63596.0 ( -40.71 by residue)
QMean score : 0.376
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