Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTLGLSSLGGTLEFYDFIIFVFFTSIIAKH-FFPNTLSPIWSEINTYGIFAAGYLARPLGGIVMAHFGDKFGRKNMFMLSILLMVIPTFALALMPTFNDLVGFGVDSMGLTPKNAHYLGYIAPVFLVLVRICQGVAVGGELPGAWVFVHEHAPQGQKNTYIGFLTASVVSGILLGSLVYIGIYMVFDKPVVEDWAWRVAFGLGGIFGIISVYL-RRFLEETPVFQQMKQDDALVKFPLKEVFKNSLFGISISMLITWVLTACILIFILFVPNFTLTHPNFHFTPFEKT---YFQILGLVGIVSSIIFTGFLADKIKPHKVCMAFSAAFGFFGFLFFKEFYSNAPSLVNTIILYFLACF-CAGIMNFCPIFMSDVFSARIRFSGISFAYNIAYAITAGFTPQLSSWLNAKAIAVPESLQSYGLSFYILIVSLIAFITSLLMAPIYHKSNTQHEVSPTA |
| 3WDO Chain:A ((11-363)) | --ATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASE--ALIGIAIG-----IYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIWG--------------------------IILGRALQGSGA--IAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIIT--------HKLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRES-GMVKGSFSKVLAE--PRLLKLNFGIMCLHMLLMSTFVALPGQLAD---AGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQ--VFVFCVGLIVVAEIVL-W---NAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYST-SQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEPPYVSSLRIEIPADIAANEALK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -341886 for 2901 contacts (-117.9/contact) +
2D Compatibility (PS) -33974 + (NN) 5938 + (LL) 3168
1D Compatibility (HY) -20000 + (ID) 1950
Total energy: -388704.0 ( -133.99 by residue)
QMean score : 0.258
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