Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQDFSSLLLKLQEYWKDQGCLVIQPYDIPAGAGTFHPATLLRSLDKKPWNVAYVAPSRRPTDGRYGENPN--RLGSYYQFQ--VVIKPSPS-----NIQELYLKSLEVLGINLNEHDIRFV-EDNWESPTLGAWGLGWEVWLDGM--EVTQFTYF---QQ--------------VGGIPCSPIPVEITYGLERLTMYVQKVENILEIEWAKKDNESVRYAQVHLESEYEFSKYHFEVASVERLLEMFKNAQAEALHCLENKLPLPAYDLVMLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAVLYKEQEEEREERLKNALTKA |
3IKL Chain:A ((202-349)) | --------------------------------------------KRLPYGLAQIGVCFHP----------VKSIGEKTEASLVWFTPPRTSNQWLDFWLRHRLQWWRKFAMSPS----NFSSSDCQDEEGRKGN--KLYYNFPWGKELIETLWNLGDHELLHMYPGNVSKLHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQRKVLKLHPCLAPIKVALDVGRGPTLELRQVCQGLFNELLENGISVWPGYLETMQSSLEQLYSKYDEMSILFTVLVTETTLENGLIHLRSRDTTMKEMMHISKLKDFLIKYISSAKNV------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IKL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34808 for 665 contacts (-52.3/contact) +
2D Compatibility (PS) -12110 + (NN) -3490 + (LL) 3532
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -49126.0 ( -73.87 by residue)
QMean score : 0.330
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