Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLQQIDELENKFEEQEEQAQDTPLKQEPSTKEVKIPKKRGRKKSLLDEDKKKSFNIAFSPCVIKELNEFLLEFGSFKETRSTFIEEALIRHLKHRKNTQEQKLLKQLERLQNKEKGIMKTMNLNEFFTHKIIYKDTPLKFKDTLEQEISQASLVEKLILANILANMVFAKISNENAPKILISRLMCKFSPIDYESTIPSDFKPIDEEEYEDDLEWLNEEKEDRLFNYYLFLNGIKESDVEEVFNESVEIYDECLIEIAQNVLKDKFSYDIDLLQVLVKGYAKEIREFLSYKPIKEIKDFKDKDTALYISLGKDYDKEKEPFSKKLQQCFKEILESKGI |
| 2CPG Chain:A ((3-43)) | ----------------------------------------------------KRLTITLSESVLENLEKMAREM---GLSKSAMISVALENYKKGQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CPG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8935 for 194 contacts (-46.1/contact) +
2D Compatibility (PS) -4456 + (NN) -2688 + (LL) 22416
1D Compatibility (HY) -2400 + (ID) 550
Total energy: 3387.0 ( 17.46 by residue)
QMean score : 0.476
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