Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKISPSPRKLSKVSTSVSFLISFALYAIGFGYFLLREDAPEPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKEEPKEKPKKEEPKKEEPKKETKPKPKPKPKPKPKPKPKPKPEPKPKPEPKVEEPKKEEPKEEPKKEEAKEEAKEKSVPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEFLMKIQTAISSKNRYPKMAQIRGIEGEVLVSFTINADGSVTDIKVVKSNTTDILNHAALEAIKSAAHLFPKPDETVHLKIPIAYSLKED |
| 1MV3 Chain:A ((270-482)) | ------------------------------------DGSPAATPEIRVNH-----------EPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPATVNGTVEGGSGAGRLDLPPGFMFKVQAQHDYTATDTDE---------------LQLKAG-----DVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCRGVFPENFTERVP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MV3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11239 for 904 contacts (12.4/contact) +
2D Compatibility (PS) -20469 + (NN) 28461 + (LL) 4808
1D Compatibility (HY) 400 + (ID) 1100
Total energy: 23339.0 ( 25.82 by residue)
QMean score : 0.421
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