Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNVFFKQQKFVIKKRFNDFNGFDIEENEVLWFELINPT-------PNELATLSQEYAIHYNTDHSQRV---SSVTKYWEDSSSVTINAFFTNQDENETFHMEMATFILSNNILFTIYYGTLE---IFD----SIQKKVLASPKKFEDGFDI--LTKIFEVYFEKGVECLEWINKQTSLLRKNIIFKETSTHDDILVRLSNLQEFNVALRDSFFDKRRIITALLRSN-K-----VDS---------DTKNNLNIILTDFSSLVESTTVNLNSLDNIQNLFASQVNVEQNKIIKLFTVATMAMMPPTLIGTIYGMNFKFMPELEWQYGYLFALIVMAISTILPVIYFKKKGWL |
| 3RKG Chain:A ((12-258)) | ------------------------SDSLFISCTVFNSKGNIISMSEKFPKWSFLTEHSLFPRDLRKIDNSSIDIIPTIMCKPNCIVINL-------------LHIKALIERDKVYVFDTTNPSAAAKLSVLMYDLESKLSSTK-NNSQFYEHRALESIFINVMSALETDFKLHSQICIQILNDLENEV-N--RLKLRHLLIKSKDLTLFYQKTLLIRDLLDELLENDDDLANMYLTVKKSPKDNFSDLEMLIETYYTQCDEYVQQSESLIQDIKSTEEIVNIILDANR---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71051 for 1433 contacts (-49.6/contact) +
2D Compatibility (PS) -23021 + (NN) -10798 + (LL) 9008
1D Compatibility (HY) -5200 + (ID) 750
Total energy: -101812.0 ( -71.05 by residue)
QMean score : 0.364
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