Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIKKSELYSSLWAGADSLRGGMDASEYKNYVLNLLFLKYISDKAKNNMDSEIEVPQGCFYEDILALEGDKEIGDKLNKIIAKIAERNDLKGVIDSVDFNDNTKLGEGKAMIDTLSNLVKIFADLSLGAHGALDDDLLGDAYEYLMRHFASESGKSKGQFYTPSEVSLLLSLLLGIDENTRQDKSIYDPTCGSGSLLLKASSLAG---KKGLTIYGQEKDISTTALCKMNMILHNSATADIAKGGSSTLSNPLFTTENGMLKTFDYVVANPPFSLKNWTDGLSIDPKSKQVINDSFNRFED-GTPPEKNGDFAFLLHIIKSLNPTGKGAVILPHGVLFRGNAEAQIRKNLLMKGYIKGVIGLAPNLFYGTSIPACVIVLDKENAH--ARKGVFVIDASKDFKKDGNKNRLREQDVQKMIDTFNALKEIPYYSKMVSLEEISLNDYNLNIPRYIAAKQELEKDLFALINSPSYLPKNEIKAYDPYFQVFKELKNTLFKKSDKEGYYALKTECENIKDLITQSLEYQTFHASVLSAFESLDLFTTFNDLEPGFNPKTLIESVCSKVLKEFEKVGILDKYGVYQLFKDYYNEVLQDDWFLISFNGFRSAKELRKLTPLKDKNKKANYLEEPDFIVQKTYYKSDLIPKHLIKQRFFEKETKELEELENALNEKEALLDEFIEEHSNEEGLFDGLKINESVLKKELKNATDLEDKQILKTALEWLEAKNKALKMKNKAYEELELKAFHQYKNLEINEIKDLIIKDKWLNSLKNALENKIQKRTNAFASALNEIISSYSNSLLELDKEVKESESKVLEHLKDLGLMG |
2F8L Chain:A ((83-325)) | ------------------------------------------------------------------------------------------------------------------------------------SNEEIRKGLQLALLKGMKHG--IQVNHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQK-MTLLHQ--DGLANLL-------VDPVDVVISDLPVGYYP-DDE-------------NAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTS-DFAKVDKFIKKNGHIEGIIKLPETLFKS-QARKSILILEKADVDVKPPKEVLLANLSSLTDPSVTAPILAEIENWFK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74054 for 1915 contacts (-38.7/contact) +
2D Compatibility (PS) -25831 + (NN) -20297 + (LL) 39052
1D Compatibility (HY) -11600 + (ID) 2250
Total energy: -94980.0 ( -49.60 by residue)
QMean score : 0.365
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