Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTGIHHVSIFTANARANFDFYTKIMGLRLVKKSVNQDDPYTYHLYYGDEIGSPGTALTFFEVPNMAKNHPSRNAISGLSLRVPSDEALHYWDKRLDEHRIFHSKPI-DQFGRKIIRLKDTDGLPVNLISDETSTQVTEVTP---W-EDSL-VPAEYAIRGLGPVRFSVFKKEKTDRLLTKILGFERIGAYEDDDKLVTVFKTGNVGLGGEVHVESRPDLEQGNLGAGGIHHVAFRVPTDGDLIGWTEMIQDLGYKNSGYVDRFY---FHSLYFRESNGILIELATDEPGFQTDFTKEHGTYVDLPPHLEERREDILAHLKPLDTDK |
| 3LM4 Chain:A ((7-278)) | FDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG----QSVYLRGYED---PYPWSLKITE--------APEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVVDGNVEIGAWMSSN-LLGHEVACMRDMT-----GGHGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAGYLH----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LM4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117912 for 2234 contacts (-52.8/contact) +
2D Compatibility (PS) -28511 + (NN) -10062 + (LL) 2536
1D Compatibility (HY) -7600 + (ID) 2550
Total energy: -164099.0 ( -73.46 by residue)
QMean score : 0.460
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