Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYVEQLNEQMVIKRDGRKASFDLIKIRNAVEASMKAINLEDETFLEEILLEVVSELPNKADMTIDEIQHCVENTLMKSTYPDVARAYIEYRHDRDHERENITDMHKSVEKLLQKDKTVVNENANKDATVFNTQRDLTAGAVAKSYALKYMLPKHVSNAHLKGEIHFHDLDYSPYHAMTNCCLIDIEGMLSKGFTIGNANVESPKSIQTATAQIAQIIANVASSQ-YGGCSVDRIDEVLSVYARLNFEKHKKDAMEWVVPEKQEGYAAEKTRKDIYDAMQSLEYEINTLYT--S-------NGQTPFVTLGFGLGEDWFA----REIQKAILKVRIGGVGKDKHTAIFPKLVFSIRRGTNLNAEDPNYDIKQLALECSSK-RMYPDVLNYDSLVRLTGDFKVPMGCRSFLPAWENENGEHVNAGRNNLGVVTLNIPRIAIQSGGDKERFWEIFHERMKTVKDALLFRLNRVRQARPENAPILYKYGAFGKRLQDGEDVDQLFNKERSTISIGYIGLYEAATVFYGGEWEGDKEAKNFTLDIVKELKAYADNWKDEYGYWFSVYSTPSESLTDRFNRLDKEKYGVIKDITDKDYYQNSFHYDVRKKIDFEKDYPEFCSGGFIHYCEYPKMVHNTKALEAVWDYSYDRVAYLGTNTPIDKCYECDFEGEFVPTEEGFKCPSCGNTDPEKADVVKRTCGYLGNPMKRPMVHGRHVEISNRVKHMENLGE |
| 2Y8N Chain:A ((314-479)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NIAHKKPANFWEAIQMTLCCHFGVVNEDPQSGLSIGRLGQVLQPFYEKDVED------------------GIMTDEEVIELLELYRIKITCIECFASAGVSGGVLSGNTFNNLSLGGQNY-DGLSAVTPLEYLIVEAGMRNQ-----TPQ-PTLSVLYDEK---T---P-EDFLMKAASCTKLGLGYPAWMNNQTGMN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y8N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61322 for 1120 contacts (-54.8/contact) +
2D Compatibility (PS) -16184 + (NN) -7263 + (LL) 34764
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -56555.0 ( -50.50 by residue)
QMean score : 0.471
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