Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------------------------MSLFFEEW-GPILWQGFLETLTMTGITLVISLAIGLPLGVFLTLTRKGGQSENLVAYSILNWVINILRSLPFIILLFLMIPVTRFV-VGTTIGIQGVIMPLVVFTAPYIARLMESALLEVDRGVVEAYQAMGISTPKIIWSVVIREARSGIVLGLTIATIGLIGA-TAMAGLVGAGGLGTIAYQYGFQRFEPTVMYTTIIILIIMVQALQSFGNFLSRRLKKD
2ONK Chain:C ((24-275))
MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYERYLSEGLSAA-----MPVAAILILLSLAVFVALRIIVG
General information:
TITO was launched using:
RESULT:
Template:
2ONK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -197634 for 1651 contacts (-119.7/contact) +
2D Compatibility (PS) -21822 + (NN) 3543 + (LL) 604
1D Compatibility (HY) -11600 + (ID) 1500
Total energy: -228409.0 ( -138.35 by residue)
QMean score : 0.289
(partial model without unconserved sides chains):
PDB file :
Tito_2ONK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ONK-query.scw
PDB file :
Tito_Scwrl_2ONK.pdb
: