Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQHQEQEKNQAFFNEQKEKVTLYLKHNIPDFKTVTFTNEEFNPIGISIDGYINNDKNLSFTAGKDVKIFSCSDELDKMFKEPRKGYDEIIEKEETSLEMPKEKTKTINEILSDLKSYEDQIITQNKI
2K3D Chain:A ((12-93))
----------AFFNEQKEKVTLYLKHNIPDFNTVTFTNEEFNPIGISIDGYINNDKNLSFTAGKDVKIFSSSEELDKMFQEPRKGYDEILEH-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2K3D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27501 for 541 contacts (-50.8/contact) +
2D Compatibility (PS) -8850 + (NN) -7375 + (LL) 3628
1D Compatibility (HY) -10400 + (ID) 3800
Total energy: -54298.0 ( -100.37 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_2K3D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K3D-query.scw
PDB file :
Tito_Scwrl_2K3D.pdb
: