Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MKKSERLNDMMLFLNDKN-VFQLSDIMTKYDISRS--TAIRDVKSLEEIGMPI----------YSERGRNGH---YQVLRNRLLSPIV-FNIDEVFALYFSMLTLKAYETTPFHL-SVEKLKTKFERCLSAEKIEM---LR-----KTEEVFSLGY-----IKHNN----------------QCEFLDVILQ-----FTMEEKVCQINYDKKGIEKTYVVQFYNISSAYG------------QWY-VTSYNFETKRMQ--VFRCDRILELEENHAFEAKKLTDLKSETDYL--YKKKDAINFEVEIASNGVDLFFKENYPSMKLNQEQGRNVIRGFYNRGEEPFIINYLLGFGDKINMVQPDSLKEMLLNELKSLQNHLQKLS------------ |
| 4KBL Chain:A ((101-554)) | YRYEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERYFDGNMPCQICYLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLKKWIKKCIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNRSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLKKNNQSIIFENNQADLENATEV--LSGYLE---RDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLW |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5977 for 1986 contacts (-3.0/contact) +
2D Compatibility (PS) -32366 + (NN) -6874 + (LL) -220
1D Compatibility (HY) -20400 + (ID) 2800
Total energy: -68637.0 ( -34.56 by residue)
QMean score : 0.172
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