Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MAKPIEEIGEEIGAKVEKVARKTGNVAGTAAKLSVYSSIWAVKTGVNKTRAFAQGFKQGWSGK
1DTC Chain:? ((1-26))
MAQDIISTIGDLVKWIIDTVNKFTKK--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1DTC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -551 for 91 contacts (-6.1/contact) +
2D Compatibility (PS) -2825 + (NN) -886 + (LL) 2444
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -3668.0 ( -40.31 by residue)
QMean score : 0.712
(partial model without unconserved sides chains):
PDB file :
Tito_1DTC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DTC-query.scw
PDB file :
Tito_Scwrl_1DTC.pdb
: