Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVLLAILSMVLLLSLAACGGSSDSSKDKNGKEEIVMWGSWSGDQIKQLEKQIDSYNKSQDKYKVKYVMQE--NVEEKLLTGIAGGELPDIIMW-DRYQTALYAPKGVLEPLDKLVKEDNLKMDDFYEESVKEMTYSDKLYGLPLLNDNRILFYNKKLLQEAGVKPPTTWDELATAAQKTTKWDGNKMTQAGMSLQDV-G-LFNLYLMQAGGE-LVTSDN------KETAFNSEQGLEVLNYWDKMQNDLKVYQRGF--DDGSDAFAAGKEAMTYNGPWALADYNKVEDLDYGVVEPPKGPNG-D-KGAIMGGFGLVMPKQAEHKDGAWDFMKWWTTKPENGVEFAKISGWLPANKIAAEDEYFTKDPNYSVFVNTMKYAKIRPTVAGYADVEGLAMKPQFEKFMNGNI-SAEKALSQAEKEGNQILKEERDK |
| 2GH9 Chain:A ((2-379)) | ----------------------------------KITVWTHFGGPELEWLKEQARTFERT-SGTKVEVVEVPFAEIKQKFILGAPQGQAADLVVTVPHDWVGEMAQAGVLEPVGKYVTQ--AYLADLQGVAVEAFTFGGRLMGLPAFAESVALIYNKKYVKE----PPRTWEEFLALAQKLTTG-ATF----GFLYNIGDPYFNFGFFKAFGAENVFAKDAKGNLDPTKLLIGGEVGEKALQFIKDLRFKYNLVPEGVDYGVADGAFKDGALAMILNGPWALGDYKK-AKVDFGIAPFPVPPGAKNPWGPFLGVQGVVVNAYSKNKTQAVNFAKTLVT-GRNLVAFNQAGGRIPVSKSAVKQ-L-EKDPVVAGFSKVFPLGAPMPNIPEMGKVW-GPWGNAISLAIQRPDSNVKKIVEDMVAEIKKAIG----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GH9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78735 for 3122 contacts (-25.2/contact) +
2D Compatibility (PS) -38526 + (NN) -14330 + (LL) 3488
1D Compatibility (HY) -21200 + (ID) 4600
Total energy: -153903.0 ( -49.30 by residue)
QMean score : 0.472
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