Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LHKLSVVIAVYNVSEYIEACLTSVLEQNYKNVELIIVNDGSTDDTFQKVEKLVDGHTNVILIDQ--------ENQGVSAVRNNGVKAATGDYLGFVDGDDIIAKDMFQKMMDSFEMSDADMVTIGVARLSGDKVYPSTLHERYMVEKKEATTIEETPALLYDTTSWNKVFKKSFWDKHHLEFPEGQMYEDIALMIPAFLYAEKVNIIPDVGYYWRSREGGAKSITQRRNDIAMVNDRLLALKKVNQVLNEKNIQGDLRYQNERKNFEIDLFSMIEWAFLAPKDYYLALQPLIKNYVEQEMKTTALNDIPKEKKRLFKALLANNRPAFLLNSYIYFGKKAVKKITK |
1QG8 Chain:A ((1-255)) | -PKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQSDISGVKERTEKTRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNDIVKETVRPAAQVTWNAPCAIDHCSVMHRYSVLEKVKEKF--GSYWDESPAFYRIGDARFFWRV---------------------------------------------------------------------------------NHFYPFYPLDEELDLNYITEFVRNLPPQRNCRELRESLKKLGMG----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78364 for 1846 contacts (-42.5/contact) +
2D Compatibility (PS) -24082 + (NN) -3753 + (LL) 8396
1D Compatibility (HY) -8800 + (ID) 2100
Total energy: -108703.0 ( -58.89 by residue)
QMean score : 0.272
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