Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYVSMKGMLERANKEHYAVMAINCFNLETARAVIDAAQELRAPIIIDLLQDHLTSHLGSRFLTKPIIKMAEEASVEVAINLDHGHDVAIVKQCLADGFSSVMMDASSFPYEENVAITKKMVEFAEVYHASVEAEVGNIGAVTGDNYTNQE--MYTDPKVAIDFAKRTGIDALAISYGSSHGDYPEGFTPAFQFDIVREIKSATNMPLVLHGGS---------------------GCGAENIRESVRLGINKINVGSDFMKAQVNQIKTNLKESP----AVNYVDLIHETIKAGTKAVKYYIHLSGSTGKSL |
| 1RV8 Chain:B ((1-305)) | MLVTGLEILKKAREEGYGVGAFNVNNMEFLQAVLEAAEEQRSPVILALSEGAMK--YGGRALTLMAVELAKEARVPVAVHLDHGSSYESVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIKKAISLGIAKINTDTDLRLAFTALIREALNKNPKEFDPRKYLGPAREAVK---EVVKSRMELFGSVGRA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169439 for 2517 contacts (-67.3/contact) +
2D Compatibility (PS) -31026 + (NN) -15967 + (LL) 216
1D Compatibility (HY) -16000 + (ID) 5100
Total energy: -237316.0 ( -94.29 by residue)
QMean score : 0.467
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