Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFMEKKHFDLNDVVEMKKPHPCGTNRFKIIRMGMDIRIKCEGCGHSVMIPRREFERKVKKILVKAEQE
3S9D Chain:A ((128-150))
--------RITLYLKEKKYSPCA---WEVVRAEI----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3S9D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6686 for 103 contacts (-64.9/contact) +
2D Compatibility (PS) -2340 + (NN) -674 + (LL) 4008
1D Compatibility (HY) -2400 + (ID) 250
Total energy: -8342.0 ( -80.99 by residue)
QMean score : 0.249
(partial model without unconserved sides chains):
PDB file :
Tito_3S9D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S9D-query.scw
PDB file :
Tito_Scwrl_3S9D.pdb
: