Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------MKHITTVVIWK-ILRCLSLV----FG-VSILTFILLKQSPVDPVMASVNY-DTSLTPVQYKAIAHHYGLDKPAPVQYFIW---LKNFIQGHL--GTSLVYRQP----VIDIIRSRAGASFILMGLSWVLSGLIGFILGTLSAFH-QGKLLD-RIVRWFSY----------LQISVPTFWIGLIFLLIFSVQL-GWFPIGISSPIGTLSQDITL--ADRIKHLILPVFTLSILG-IANVTLHTRTKMMSVLSSEYVLFARARGETEWQIFKNHCLRNAIV-PA-ITLH-----------FSYFGEL-FGGSVLAEQVFSYPG-LGSTLTEAGLKSDTPLLLAI-VMIGTLFVFAGNLIADILNSIINPQLRRKV---------------------------------- |
| 4OY2 Chain:A ((10-502)) | NLNIQHSQPAINLQSPFYKVAVPRYQLRHFHRENFGSHIRPGTKIVFSKLKARKRKRDKGKDVKESFSTSQDLTIGDTAPVYLMEYSEQTPVALSKFGMANKLINYYRKANEQDTLRPKLPVGETHVLGVQDKSPFWNFGFVEPGHIVPTLYNNMIRAPVFKHDISGTDFLLTKSSGFGISNRFYLRNINHLFTVGQTFPVEEIPG--PNSRKVTSMKATRLKMIIYRILNHNHSKAISIDPIAKHFPDQDYGQNRQKV--KEFMKYQRDGPEKGLWRLKDDEKLLDNEAVKSLITPEQISQVESMSQGLQFQEDNEAYNF---DSKLKSLEENLLPWNITKN--FINSTQMRAMIQIHGVGDPTGCGEGFSFLKTSMKHSYNVAQQQKAYDEEIAKTWYTHTKSLSISNPFEEMTNPDEINQTNKHVKTDRDDKKILKIVRKKRDENGIIQRQTIFIRDPRVIQGYIKIKEQDKEDVN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105850 for 1732 contacts (-61.1/contact) +
2D Compatibility (PS) -31245 + (NN) 15554 + (LL) 660
1D Compatibility (HY) 27200 + (ID) 700
Total energy: -94381.0 ( -54.49 by residue)
QMean score : -0.063
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