Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSPEERYSSLRRFATEIRLNTLETLNHLGFGHYGGSLSIVETLAILYGDIMDINPEKFKESDRNYMVLSKGHAGPALYSTLYLKGF-FDKTFLHSLNTNGTKLPSHPDRNLTPGIDVTTGSLGQGISIATGIAYAQKIENSSY----------YTYTIVGDGELNEGQCWEAIQFAAHHQLHHLIVFVDDNKKQLDGLTADICNPGDFVAKFEAFGFDAVRVK--GDDIEAIDKAIKTFQDSNSVKPKCIVLDSIKGQGVKELEELASNHHLRPDLQQKTMLERAVISLRESLEVVE |
| 1TKA Chain:B ((11-251)) | ---------------STIRILAVDTVSKANSGHPGAPLGMAPAAHVLWSQ-MRMNPTNPDWINRDRFVLSNGHAVALLYSMLHLTGYDLSIEDLKQFRQLGSRTPGHPEFEL-PGVEVTTGPLGQGISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGCLQEGISSEASSLAGHLKLGNLIAIYDDNKITIDGATS-ISFDEDVAKRYEAYGWEVLYVENGNEDLAGIAKAIAQAKLSKD-KPTLIKMTTTIGYGSLHAGSHSVHGAPLKADDVKQLKSKFGFNPDKSFVVPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98357 for 1896 contacts (-51.9/contact) +
2D Compatibility (PS) -25288 + (NN) -14935 + (LL) 1460
1D Compatibility (HY) -13200 + (ID) 4400
Total energy: -154720.0 ( -81.60 by residue)
QMean score : 0.530
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