Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNINGIKLLSSRAVSKLGDVLYDYGNSTWIASMGGLGQKILGIYQIVELLVSIVLNPFGGALADRFQRRKILLITDAICAI--MCFLLSFIGDDKVMVYGLIVANAILAVSNAFSSPAYKSYIPEIVDKADIITYNANLETIVQIISVSSPVLGFLIFNNFGIRITLIVDAITFLISFLFLYAIKVERVQ--LSKQEKVAIKNILADIADGFTYIKKEKEIMFFLIIAALLNTFLAMFNYLLPFTNSLLKTSGAYATILSISAIGSIIGALIARKIKSSINSMLSMLVFSSLGVIVMGFPSLFEL---PIWISYSGSFLFNSLLTMFNIHFFSQV-- |
| 3N54 Chain:B ((1-344)) | -DIEQLSFARGLAIDETND--HQYKLTYQNLLPQSGKPEFVNVTSHGKTILEAVSDVSIKDPPVYSDHLKVILLGEKLMRNQNVDQVLNHFIRDDELRRSSYLMAARGNAADVFTKGNPKIMIP-----------LRIGRASVYSQNGYSYLIQAVKNEKGKAKYD-----------GAGIIKRGSNKLVGFLSADETQTLSWVMGTIQGGVMPTTDKGHPITFEIKKSKTKIKPVIENGKPVFHISVKTKGILTEDQNFSKSYLHRLENIFEKKLERDVKQVMDKLQHE-YKTDPVFLSDHIRIQHPDYWNKVKGHWDEIFSETDFKYDISFKIIN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234603 for 2064 contacts (-113.7/contact) +
2D Compatibility (PS) -31345 + (NN) 5886 + (LL) 3036
1D Compatibility (HY) 3600 + (ID) 1600
Total energy: -255026.0 ( -123.56 by residue)
QMean score : 0.074
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