Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIEALMEKERRVQYRLLSFLRGSPQAIALKLALLETGLSRATLLKYINNLNSYFEQEKVNCRIVYYKDKLFLEEDYNLSNQEVLKALMKDSIKYTILISLFNQRQFTIVGLSQELMVSEATLNRHLAHLNELLAEFDIAISQG---KQIGDELQWRYFYYELFKQLWSYDKCQNMIK---KLDLDSLILLIERLAQHTLTREAQQNLGLWFSICHHRLLAMEKISDNLKPIVEH-YQCNAFYKRLDAALVLYMSRFALEYREGEVLATFAFLHSQNILPINTMEYIMGFGGPIIDCVTETIIYFKKESILADETSDQVIYQLGQLYSHYYFFKGHILVEQPDLEQTYRLIDHNMRDKLHHISKKIIANVNRIRPLTEDGCSLLTLHLLELLIFSKNSQKMPFRIGLDMTGNAVEQSLLEYRIRQHFSGNNSIQVEPYDEGKGFDMVIYQSRSRPYKAKLTYCLNKGASERELQEIDSLIYDN |
| 3RIO Chain:A ((31-177)) | ------------------------------------------------------------------------------------------------------------------------------HKYSEVVLIGKGIGFGKKQDDVIEDKGYDKMFILKDEKEQK-QFKKLLDYVDEKLVDISNDVIYHISNRTNHSLNEHIHIALTDHIAFAIKRQQQGF--DMKNPFLMETQSLYPEEYQIAKEVIDMINEKAGLCLPEGEIGFIALHIHSALTN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79321 for 964 contacts (-82.3/contact) +
2D Compatibility (PS) -14342 + (NN) -3913 + (LL) 26796
1D Compatibility (HY) -800 + (ID) 900
Total energy: -72480.0 ( -75.19 by residue)
QMean score : 0.279
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