Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALFSKKDKYIRISPNKALGSSDKRSLPEVPDELFAKCPSCKHMIYQKDLG-LA----KICPACSYNFRISAQERLLLTVDEDSFEELFTGIETKDPLNFPNYREKLAATRQKTNLDEAVVTGLAKIKGQTTALAIMDSHFIMASMGTVVGEKLTRLFELATEKKLPIVIFTASGGARMQEGIMSLMQMAKVSAAVKRHSNQGLFYLTILTDPTTGGVTASFAMEGDIILAEP-QALVGFAGRRVIETTVREDL-PEGFQKAEFL-LEHGFVDAIINRT-ELRDCIAQLIAFHGNEVGHE |
| 3IAV Chain:A ((11-263)) | ----------------------------------IHTTAGKLADLRRRIEEATHAGSARAVEKQHAKGKLTARERIDLLLDEGSFVELDEFARH-RSTNFGLD--------ANRPYGDGVVTGYGTVDGRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALKTGCPVVGINDSGGARIQEGVASLGAYGEIFRRNTH-ASGVIPQISLVVGPCAGGAVYS-PAITDFTVMVDQTSHMFITGPDVIKTVTGEDVGFEELGGARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYLPSNNLSE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IAV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124149 for 2002 contacts (-62.0/contact) +
2D Compatibility (PS) -26642 + (NN) -14691 + (LL) 2836
1D Compatibility (HY) -6800 + (ID) 2600
Total energy: -172046.0 ( -85.94 by residue)
QMean score : 0.380
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