Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MADISIISMILVVIVAFFAGL-----EGILDQFQIHQPLVACTLIGLVTGHLEAGIILGGSLQMIALAWANIGAAVAPDAALASVAAAIILVKSGDFTQKGINFAFSTAVPLAIAGL----------FLTMIVRT--------ISTALVHAGDKAASEGNFAAIERFHFIALLLQGLRIA-------FPAALLLAIPSSSVQSILEAMPDWLNGGMQVGGAMV---VAVGYAMVINMMAT-REVWPF-FALGFALAALNQLTLIAMGTIGVAIALIYISLSKMGGSKGTSNAGSND-PIGDILEDY |
| 4WBX Chain:C ((12-390)) | RFPFPVGEPDFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVD-------------GVVIQMEDEIASIAAAIGASWAGAKAMTATSGPGFSLM------QENIGYAVMTETPVVIVDVQRSGLPAQGDIMQAIWGTHGDHSLIVLSPSTVQEAFDFTIRA-FNLSEKYRTPVILLTDAEVGHMRERVYIPNPDEIEIINRLIKRIVEKIEKNKKDIFTYETYELEDAVATGIVARSALLLKIETIWPFDFELIERIAERVDKLYVPEMNLGQLYHLIKEGANGKAEVKLISKIGGEVHTPMEIFEFI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WBX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243021 for 2037 contacts (-119.3/contact) +
2D Compatibility (PS) -26281 + (NN) -1059 + (LL) 924
1D Compatibility (HY) -10800 + (ID) 2550
Total energy: -282787.0 ( -138.83 by residue)
QMean score : 0.175
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