Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLYFPSISEETF-DFEAD-------WLVKAMDDNQKRIL----FVGQGKNGDLELELNYQDNPEPFDNLSVGELVQLP--KELFVVPETISYQP-QYECF-----------------
2HW4 Chain:A ((18-141))
-LYFQSMDLALIPDVDIDSDGVFKYVLIRVHSAESKEIVRGYKWAEYHADIYDKVSGDMQKQGCDCECLGGGRISHQSQDKKIHVYGYSMAYGPAQHAISTEKIKAKYPDYEVTWAN
General information:
TITO was launched using:
RESULT:
Template:
2HW4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10253 for 527 contacts (-19.5/contact) +
2D Compatibility (PS) -8727 + (NN) 2599 + (LL) 208
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -22223.0 ( -42.17 by residue)
QMean score : 0.192
(partial model without unconserved sides chains):
PDB file :
Tito_2HW4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HW4-query.scw
PDB file :
Tito_Scwrl_2HW4.pdb
: